Action 853

FAW
COST ACTION 853

ACW Agroscope Changins-Wädenswil

Swiss Federal Research Station for Horticulture

Agenda
MC Meeting, September 24 - 26, 2003 Bremen


EUROPEAN COMMISSION
RESEARCH DIRECTORATE-GENERAL
Directorate B: European research area: structural aspects
Cost

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Cost Action 853
Agricultural Biomarkers for Array Technology

Management Committee Meeting
and combined
Meeting of Working Group 4


September 24 - 26, 2003

Centre of Applied Gensensorik (CAG), University of Bremen, Germany
in the Centre of Environmental Research and Technology (UFT)

Agenda

Wednesday, September 24

13:30 Registration and Welcome

14:00 Management Committee Meeting, Part 1

1. Welcome to participants
2. Adoption of agenda
3. Minutes of last meeting
4. Report from the Scientific Officer
o News from the Commission
o Status of Action
o Number of Signatories
o Budget Status, budget allocation process
5. Budget planning 2003/04
6. STSM status, applications
7. Public
ations, annual report

15:30 - 16:00 Coffee Break

8. Evaluations
9. Request for new members
10. Non-COST participations
11. Web news

17:30 End of Management Committee Meeting, Part 1


Thursday, September 25

08:30 - 08.45 Welcome address
D. Blohm, Centre of Applied Gensensorik (CAG)
08:45 - 09.30 "The Bremen Gensensorik Project"
D. Blohm, Speaker of the Centre of Applied Gensensorik (CAG)
09:30 - 10.00 "New opportunities with LNA-based microarrays"
N. Ramsing, Director for New Technologies, Exiqon A/S, Denmark (guest)

10:00 - 10:30 Coffee Break
10:30 - 10:50 "Bioinformatics tools for choosing the right capture sequences"
U. Bohnebeck et al., Bremerhaven Institute of Biological Information (BIBIS)
10:50 - 11:10 "Using the ARB-tool for identification of microorganisms"
O. Glöckner et al., Max-Planck-Institute for Marine Microbiology (MPI)
11:10 - 11:30 "Pittfalls and solutions for target quantification by microarray analysis"
J. Peplies et al., UFT, Biotechnology and Molecular Genetics
11:30 - 11:50 "Constructing a flow-through microarray hybridisation chamber"
M. Gheorghe et al., Institute for Microsensors, Actors and Systems (IMSAS)
11:50 - 12:10 "Advanced technologies for mass production of reliable microarrays"
U. Steller et al., Director of Research, PicoRapid Technology GmbH, Bremen

12:10 - 13.30 Lunch at Cafeteria

Room: Facility of PicoRapid Technology GmbH, Fahrenheitstr. 1

13.45 - 14.15 Production of microarrays - a demonstration

Room: UFT-1790

14.30 - 14.50 "Applying microarray technology in milk industry"
Ch. Glöckner et al., UFT, Biotechnology and Molecular Genetics
14.50 - 15.10 "On the way to identify fish eggs and larvae by the help of microarrays"
N. Silkenbeumer et al., UFT, Biotechnology and Molecular Genetics

15.10 - 15.40 Coffee Break

UFT, first floor, CAG-Laboratories

15.45 - 17.45 Poster session
and parallel
15.45 - 17.45 Demonstration of microarray handling

20 h : Dinner at "Haus am Walde"


Friday, September 26

08:00 - 12:00 Management Committee Meeting, Part 2

12. Report of the WG-Coordinators on their activities since our last meeting

WG1. Nucleic-Acid Based Microarrays, Peter Bonants
WG2. Protein-Based Microarrays, Ian Barker
WG3. Bio-Informatics and Information Dissemination, Peter von Rohr
WG4. see Thursday, September 25
WG5. Microarray Technology for Environmental Monitoring, Xavier Nesme

10:00 - 10:30 Coffee Break

13. Long-term planning
15. part I AOB

12:00 End of Management Committee Meeting, Part 2

12:00 - 14:00 Lunch

14:00 - 17:00 Management Committee Meeting, Part 3

14. Time and place of next meeting
15. part II AOB


17:00 End of Management Committee Meeting



List of Participants

NESME Xavier
Université Claude Bernard Lyon 1
Laboratoire d'Ecologie Microbienne
UMR CNRS 5557
43, boulevard du 11 novembre 1918
69622 Villeurbanne Cedex
France
Tel +32 4 72 44 82 89
Fax +32 4 72 43 12 23
Email nesme@univ-lyon1.fr

NICOLAISEN Mogens
Danish Institute of Agricultural Sciences
Dep. Of Plant Protection
Research Centre Flakkebjerg
DK - 4200 Slagelse
Denmark
Tel 45 58 11 34 70
Fax 45 58 11 33 01
Email mogens.nicolaisen@agrsci.dk

OGER Christine
Université Claude Bernard Lyon 1
Laboratoire d'Ecologie Microbienne
UMR CNRS 5557
43, boulevard du 11 novembre 1918
69622 Villeurbanne Cedex
France
Tel +32 4 72 44 82 89
Fax +32 4 72 43 12 23

OLMOS Antonio
Instituto Valenciano de Investigaciones Agrarias (IVIA)
Departamento de Protección Vegetal y Biotecnología
Laboratorio de Virología e Inmunología
Apartado Oficial, 46113 Moncada, Valencia.
Spain
Tel +34 96 3424000 Exts. 70137, 70138
Fax +34 96 3424001
Email aolmos@ivia.es

PFUNDER Monika
Swiss Federal Research Station for Fruit-Growing,
Viticulture and Horticulture (FAW)
CH - 8820 Wädenswil
Switzerland
Tel +41 1 783 61 87
Fax +41 1 780 63 41
Email monika.pfunder@faw.admin.ch

POLTRONIERI Palmiro
ISPA-CNR
via Monteroni km. 7
73100 Lecce
Italy
Tel +39 0832 420000
+39 320 0113227
Email palmiro.poltronieri@ispa.cnr.it

PULAWSKA Joanna
Institute of Pomology and Floriculture in Skierniewice
18, Pomologicna str.
96-100 Skierniewice
Poland
Tel +4846 833 20 21 (ext. 375)
Fax +4846 833 32 28
Email jpulaw@insad.pl

RAMSING Niels
Exiqon
Bygstubben 9
2950 Vedbaek
Denmark
Tel +45 45 66 08 88
Fax +45 45 66 18 88
Email ramsing@exiqon.com

RUIZ Ana
Departamento de Bioquimica y Biologia Molecular
Facultad de Biologicas. Universitat de Valencia
Dr. Moliner 50
46100 Burjassot (Valencia)
Spain
Tel +34 96 354 4446 (DNA-Chips lab)
Fax +34 96 354 4635
Email ana.belen.ruiz@uv.es

SIP Miroslav
Institute of Plant Molecular Biology
Academy of Sciences
Branisovska 31
CZ-37005 Caske Budejovice
Czech Republik
Tel 420 38 777 55 02
Fax 420 38 531 03 56
Email sip@umbr.cas.cz

SPAK Josef
Institute of Plant Molecular Biology
Academy of Sciences
Branisovska 31
CZ-37005 Ceske Budejovice
Czech Republik
Tel 420 38 777 55 46
Fax 420 38 530 03 56
Email spak@umbr.cas.cz

VALKONEN Jari
Plant Pathology Laboratory
Department of Applied Biology
P. O. Box 27
FIN - 00014 University of Helsinki
Finland
Tel +358 9 191 58 570
Fax +358 9 191 58 727
Email jari.valkonen@helsinki.fi

VON ROHR Peter
Institute of Scientific Computing
ETH-Zentrum, HRS H23
CH - 8092 Zurich
Switzerland
Tel +41 1 632 7473
Fax +41 1 632 1374
Email vonrohr@inf.ethz.ch

WILLIAMS John
COST - Co-ordination in the field of Scientific and Technical Research
European Commission
200, rue de la Loi (SDME 9/75)
B - 1049 Brussels
Belgium
Tel +32 2 299 15 99
Fax +32 2 296 42 89
Email john-b.williams@cec.eu.int

ADAM Günter
Institut für Angewandte Botanik
Universität Hamburg
Ohnhouststr. 18
22609 Hamburg
Germany
Tel +49 40 42 8 16 562
Fax +49 40 42 8 16 555
Email guenter.adam@iangbot.uni-hamburg.de

BARKER Ian
Head Immunological & Molecular Methods Team
Central Science Laboratory
Sand Hutton
York YO41 1LZ
United Kingdom
Tel + 44 (0) 1904 462332
Fax + 44 (0) 1904 462111
Email i.barker@csl.gov.uk

BLOHM Dietmar
University of Bremen, FB2-UFT
Centre of Applied Gensensorik (CAG)
Leobener Straße
28359 Bremen
Germany
Tel +49 (0) 421 218 4780
Fax +49 (0) 421 218 7578
Email dhb@biotec.uni-bremen.de

BODROSSY Levente
ARCS Seibersdorf research GmbH
A-2444 Seibersdorf
Austria
Tel +43 50 550 3548
Fax +43 50 550 3444
Email levente.bodrossy@arcs.ac.at

BONANTS Peter
Plant Research International
Business Unit Biointeractions and Plant Health
P. O. Box 16
NL - 6700 AA Wageningen
Netherlands
Tel +31 317 47 6213
Fax +31 317 41 8094
Email p.j.m.bonants@plant.wag-url.nl

FASOULA Dionysia A.
Molecular Genetics and Breeding
Agricultural Research Institute
P.O. Box 22016
1516 Nicosia
Cyprus
Tel +357 22 403 125
Email dfasoula@arinet.ari.gov.cy

FONSECA Filomena
Faculdade de Ciências do Mar e do Ambiente
Universidade do Algarve
Campus de Gambelas
8000-117 Faro
Portugal
Tel 351289 800 995
Fax 351289 818 353
Email ffonseca@ualg.pt

FREY Beatrice
Swiss Federal Research Station for Fruit-Growing,
Viticulture and Horticulture (FAW)
CH - 8820 Wädenswil
Switzerland
Tel +41 1 783 63 32
Fax +41 1 780 63 41
Email beatrice.frey@faw.admin.ch

FREY Jürg E.
Swiss Federal Research Station for Fruit-Growing,
Viticulture and Horticulture (FAW)
CH - 8820 Wädenswil
Switzerland
Tel +41 1 783 63 32
Fax +41 1 780 63 41
Email juerg.frey@faw.admin.ch

KATIS Nikolaos I.
Aristotle University of Thessaloniki
Faculty of Agriculture, Plant Physiology
54006 Thessaloniki
Greece
Tel +30310 998857
Fax +30310 998854
Email katis@agro.auth.gr

KLEMSDAL Sonja Sletner
The Norwegian Crop Research Institute
Plant Protection Centre
Høgskoleveien 7
1430 ÅS
Norway
Tel +47 64 94 92 57
Fax +47 64 94 92 26
Email sonja.klemsdal@planteforsk.no

LOJKOWSKA Ewa
Intecollegiate Faculty of Biotechnology
University of Gdansk
Medical University of Gdansk
24 KLADKI str.
80 - 822 Gdansk
Poland
Tel +48 58 320 22 48
Fax +48 58 301 28 07
Email lojkowsk@biotech.univ.gda.pl

MAES Martine
Centrum Landbouwkundig Onderzoek
Afdeling Plantenziekten - Dept. Gewasbescherming
B. Van Gansberghelaan 96
9820 Merelbeke
Belgium
Tel + 32 9 272 24 74
Fax + 32 9 272 24 29
Email m.maes@clo.fgov.be

MALINOWSKI Tadeusz
Research Institute of Pomology and Floriculture
Pomologiczna 18
96-100 Skierniewice
Poland
Tel ++ 48 46 833 20 21
Fax ++ 48 46 833 32 28
Email tmalin@insad.pl