Action 853

FAW
COST ACTION 853

ACW Agroscope Changins-Wädenswil

Swiss Federal Research Station for Horticulture

Presentations
September 16 - 17, 2004, Helsinki, Finland

Oral presentations , Posters

Oral presentations

Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA
Anna-Christine Syvanen, Uppsala University, Sweden

soon available

pUMA, Padlock based Universal Multiplex Array, a useful tool for multiplex detection
Cor Schoen, Plant Research International Wageningen, The Netherlands

soon available
Microarray-based identification of cucumber mosaic viruses beyond serogroups
Juerg Frey, Federal Research Station for Horticulture, Waedenswil, Switzerland
Guenther Adam, University of Hamburg, Germany
soon available
Strategies for development of a microchip for compost evaluation
Martin Romantschuk, Dept. Ecological and Environmental Sci. University of Helsinki, Finland
soon available

Application of the methanotroph microarray to the high-throughput analysis of landfill site cover soils; analysis based on mRNA indicating activity as well as presence
Levente Bodrossy, Seibersdorf Research, Seibersdorf, Austria

Extracting, fragmentation and labelling of genomic bacterial DNA for PCR-free microarray analysis of milk
Dietmar Blohm, Centre for Applied Gensensorik (CAG), University of Bremen, Germany
soon available
Microarray hybridization platforms
Petri Auvinen, University of Helsinki, Finland
soon available
Evaluation of Phytophthora probes with PamGene 3D microarrays
Peter Bonants, Plant Research International Wageningen, The Netherlands
soon available
DNA microarray to detect toxic and nontoxic cyanobacteria
Kaarina Sivonen, University of Helsinki, Finland
soon available
Diagnostic chip - developing microarrays for the detection of potato pathogens
Neil Boonham, Central Science Lab, York, United Kingdom
soon available
Micro array based detection of forest pathogens
Jan Stenlid, Dept of Forest Mycology and Pathology, Swedish University
soon available
Horticulture becomes 'high tech': Multiplex detection of plant pathogens by DNA arrays
Bart Lievens, Scientia Terrae Research Institute, Sint Katelijne-Waver, Belgium
Detection of microbes in compost using an oligonucleotide microarray
Ingrid Franke-Whittle, Institute for Microbiology, Innsbruck, Austria
Application of Conducting Polymers in DNA Sensors
Arunas Ramanavicius and Almira Ramanaviciene, Vilnius University, Lithuania
A platform for 16S rDNA microarray analyses of food-related microbial communities
Knut Rudi, MATFORSK Norwegian Food Research, Ås, Norway
soon available
Functional genomics analysis of virus resistance expression in potato
A. Vuorinen, Department of Applied Biology, University of Helsinki, Finland
soon available

Poster session

Application of modified AFLP for differentiation of bacteria for the species Pseudomonas
Ewa Lojkowska & Monika Slawiak, Dpt. Plant Protection & Biotechnology, University Gdansk, Poland

soon available

Validation of probes based on LAB Tu-EF gene and their application as DNA arrays for analysis of Lactobacillus species in dairy products
Simona Greco , O.F. D'Urso, A. Logrieco, P. Poltronieri & Q. Migheli , Dpt. Plant Protection,
University Sassari. Italy

soon available
Design of a macroarray for the analysis of Trichoderma harzianum-Rhizoctonia solani interaction
Quirico Migheli & Simona Greco, Dpt. Plant Protection University Sassari. Italy
soon available
pUMA, Padlock based Universal Multiplex Array, a useful tool for multiplex detection
Cor Schoen & Peter Bonants, Business Unit Biointeractions & Plant Health, Plant Research
International, Wageningen, The Netherlands

soon available

COST Action 853 - Agricultural Biomarkers for Array-Technology
Monika Pfunder, Dpt. of Crop Protection, Swiss Federal Research Station, Waedenswil,
Switzerland

Identification of infection specific EST's during head blight of barley and their differential expression during infection
Angelika Felk, University of Hamburg, Biocentrer Klein Flottbek, Hamburg, Germany
soon available
Basic Electrochemical Detection of Target DNA
Almira Ramanaviciene & Arunas Ramanavicius , Dpt. Analytical and Environmental
Chemistry, Vilnius University, Lithuania

soon available
Title to be announced
Even Heir, Norwegian Food Research Institute, Ås, Norway
soon available
Major Virulence Factors of Fusarium graminearum and Their Use in Micro Arrays to find targets to combat the fungus
Frank Maier, University of Hamburg, Biocentre Klein Flottbek, Hamburg, Germany
soon available

Electronic biochip for the simultaneous detection and characterization of potato viruses
Antonio Olmos & Ana Ruiz-Garcia, IVIA and University of Valencia, Valencia, Spain

Analysis of wood formation with microarrays; Far-reaching involvement of PAL1 and PAL2 in total metabolism
A. Rohde, E. Messens, K. Moreel, G. Goeminne, M. Vuylsteke & W. Boerjan, Dpt of Plant
Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University

Rohde et al, The Plant Cell, (2004) in press
soon available
Heterosis-associated gene expression in early development of maize
Stephanie Meyer, University of Hamburg, Biocentre Klein Flottbek, Hamburg, Germany
soon available
Expression profiles of central cell ESTs during fertilisation and early endosperm development
Stephan Scholten, University of Hamburg, Biocentre Klein Flottbek, Hamburg, Germany
soon available
Fish and Chips, a 6FP-EU funded microarray project for identifying marine organisms
Dietmar Blohm, Centre for Applied Gensensorik (CAG), University of Bremen, Germany
soon available
Gensensor-Nanoparts, a 6FP-EU funded microarray project for improving gene sensor sensitivity
Dietmar Blohm, Centre for Applied Gensensorik (CAG), University of Bremen, Germany
soon available

Monitoring for contaminating microorganisms in the environment using DNA array technology
Christiane Beckmann, Kantonales Laboratorium Basel-Stadt, Switzerland