Action 853

FAW
COST ACTION 853

ACW Agroscope Changins-Wädenswil

Swiss Federal Research Station for Horticulture

Presentations
June 20- 21, 2005, Gdansk, Poland

Oral presentations , Posters

Oral presentations

THE APPLICATION OF MICROARRAY TECHNOLOGY IN THE STUDIES OF PLANT - MICROBE INTERACTIONS
A. Zmienko, J. Podkowinski, L. Handschuch, W. Wloszczak, M.M. Sikorski, A.B. Legocki, M. Figlerowicz, Institute of Bioorganic Chemistry, Polish Academy of Sciences
Z. Noskowskiego 12/14, 61-704 Poznan, Poland

 

ON SOME PRINCIPLES OF DNA MICROARRAYS DESIGN AND DATA ANALYSIS
Piotr Formanowicz, Institute of Computing Science, Institute of Bioorganic Chemistry, Poznan University of Technology & Polish Academy of Sciences, Poznan, Poland

 
DIAGNOSTIC APPLICATION OF PADLOCK PROBES - MULTIPLEX DETECTION OF PLANT PATHOGENS USING UNIVERSAL MICROARRAYS
Marianna Szemes, Peter Bonants, Marjanne de Weerdt, Johan Baner 1, Ulf Landegren 1 and Cor D. Schoen*, Plant Research International B.V., Droevendaalsesteeg 1, Wageningen 6708PB, The Netherlands
1 Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, SE-751 85 Uppsala, Sweden

 
PROTEIN MICROARRAYS: ASSAYS AND SYSTEMS
Markus F. Templin, Head Assay Development
NMI - Naturwissenschaftliches und Medizinisches Institut an der Universität Tübingen, Markwiesenstraße 55, 72770 Reutlingen

 

MULTIPLEX DETECTION OF VIRAL AND BACTERIAL PATHOGENS WITH THE LUMINEX TECHNOLOGY, A FLUID MICROARRAY SYSTEM
Van der Wolf JM, Peters J & Bergervoet JHW, Plant Research International, PO Box 16, 6700 AA Wageningen, The Netherlands

COST 853 PLANT VIRUS NUCLEIC ACID MICROARRAY: RINGTESTING AND RESULTS
Neil Boonham, Jenny Tomlinson, Gina Donovan, Kathy Walsh and Ian Barker, Central Science Laboratory, Sand Hutton, York, YO41 1LZ, UK

DIAG CHIP UPDATE: RING TESTING AND COMPARISONS OF SLIDE CHEMISTRIES
Jenny Tomlinson, Johanna Obreque Contreras, Ian Barker and Neil Boonham, 1Central Science Laboratory, Sand Hutton, York, YO41 1LZ, UK.

 
NUCLEIC ACID MICROARRAY APPLICATION TO POTATO AND GRAPEVINE PATHOGEN INTERACTION STUDIES
Maja Ravnikar, Maruša Pompe - Novak, Kristina Gruden et al, National Institute of Biology, Vecna pot 111, 1000 Ljubljana, Slovenia
A DNA OLIGO ARRAY FOR IDENTIFICATION OF PHYTOPHTORA SPP. TO THE SPECIES LEVEL
Lassaad Belbahri, Gautier Calmin and François Lefort, Lab. Of Applied Genetics, University of Applied Sciences of Western Switzerland,, School of Engineering of Lullier, 150 Route de Presinge, 1254 Jussy, Switzerland
 
OLIGONUCLEOTIDE-BASED MICROARRAY DETECTION OF PLANT VIRUSES
M. Sip (a), D. Bystricka (b,c), O. Lenz (b,c), I. Mraz (b), L. Piherova (d), S. Kmoch (d)
(a) Department of Medical Physics and Biophysics, Faculty of Health and Social Studies, University of South Bohemia, Dukelska 3, 370 01 Ceske Budejovice, Czech Republic
(b) Institute of Plant Molecular Biology, Academy of Sciences of the Czech Republic, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic
(c) Faculty of Biological Sciences, University of South Bohemia, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic
(d) Institute of Inherited Metabolic Diseases, 1st Faculty of Medicine, Charles University, Ke Karlovu 2,128 53 Prague 2, Czech Republic

PARALLEL DETECTION OF FRUIT-TREES VIRUSES BY OLIGONUCLEOTIDE MICROARRAYS
O.Lenz (1,2), K.Petrzik (1)
(1)-Institute of Plant Molecular Biology, Academy of Sciences of the Czech Republic, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic
(2)- University of South Bohemia, Faculty of Biological Sciences, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic

 
THRU-HOLE OPENARRAY TECHNOLOGY
Marianna Szemes, Ronald van Doorn, Peter Bonants, Alan Carter1 and Cor D. Schoen,
Plant Research International B.V., Droevendaalsesteeg 1, Wageningen 6708PB, The Netherlands
1BioTrove, Inc. 12 Gill Street Woburn, MA 01801-1728, USA

CONDUCTIVE SYNTHETIC POLYMERS AND METAL NANOPARTICLES AS STRUCTURAL COMPONENTS OF MICROARRAYS
Jerzy Lewosz, Tomasz Pilecki, Plant Breeding and Acclimatization Institute, 76-009 Bonin Poland
THE IMPORTANCE OF NONSTANDARD METHODS IN SYSTEMATIC ENTOMOLOGY
Judita Kinkorová1, Monika Pfunder2
1Department of Zoology, Charles Univerzity, Vinicná 7, CZ-128 44 Praha 2, CZECH REPUBLIC
2Agroscope FAW Wädenswil, Molekulare Diagnostik, Schloss, Postfach 185, CH-8820 Wädenswil, SWITZERLAND

PLANT HEALTH ERANET PROPOSAL AND FUNDING OPPORTUNITIES IN FP7
Ian Barker, Central Science Laboratory, York, UK
 

Poster session

PRELIMINARY STUDIES ON GENETIC VARIABILITY OF BIPOLARIS SOROKINIANA ISOLATED FROM SPRING BARLEY BY RAPD-PCR
Anna Baturo, University of Technology and Agriculture, Department of Phytopathology
Ks. Kordeckiego 20, 85-225 Bydgoszcz, Poland

DEVELOPMENT OF A MONITORING SYSTEM FOR MICROORGANISMS IN THE ENVIRONMENT USING DNA ARRAY TECHNOLOGY
Christiane Beckmann, Guido Vogel, Valérie Lemée#, Gerhard M. Kresbach*, Urs Vögeli, André Herrmann
Kantonales Laboratorium Basel-Stadt, Kontrollstelle für Chemie- und Biosicherheit, Kannenfeldstrasse 2, 4056 Basel, Switzerland;
# former Zeptosens AG, * Zeptosens, a Division of Bayer (Schweiz) AG, Benkenstrasse 254, 4108 Witterswil, Switzerland

BACTERIAL EXPRESSION OF RECOMBINANT PLANT VIRAL PROTEINS FOR RAISING ANTIBODIES
N. Cerovská, T.Pecenková, Institute of Experimental Botany CAS, Na Karlovce 1, 160 00 Prague 6, Czech Republic
MIKROARRAYS IN COMPOST
Ingrid Franke-Whittle, University of Innsbruck, Bauteil V, Technikerstrasse 25, A-6020, Innsbruck, Austria

NANOPARTICLES AS IMMUNOSORBENTS AND MARKERS FOR DETECTION OF POTATO PATHOGENS
Jerzy Lewosz, Tomasz Pilecki, Plant Breeding and Acclimatization Institute, 76-009 Bonin

 

PCR ASSAY DETERMINATION OF DEOXYNIVALENOL AND NIVALENOL CHEMOTYPES OF FUSARIUM CULMORUM ISOLATES FROM VARIOUS LOCATIONS OF WINTER WHEAT CULTIVATION IN POLAND
Aleksander Lukanowski, University of Technology and Agriculture, Department of Phytopathology, Ks. Kordeckiego 20, 85-225 Bydgoszcz, Poland
ELEKTRONIC DNA CHIP FOR DETECTION OF POTATO VIRUSES IN POTATO TUBERS
José E. Pérez-Ortín1,2, Bárbara M. Bono2, Antonio Olmos3, Ana B. Ruiz-García2,3 and Mariano Cambra3.
1Servicio de Chips de DNA-SCSIE. Universitat de València. 2Departamento de Bioquímica y Biología Molecular. Universitat de València. 3Departamento de Protección Vegetal y Biotecnología. Instituto Valenciano de Investigaciones Agrarias (IVIA). Valencia, Spain
.
MICROARRAY BASED DIAGNOSTICS OF PEST FRUIT FLIES
Monika Pfunder and Jürg E. Frey
Agroscope FAW Wädenswil, Molekulare Diagnostik, Schloss, Postfach 185, CH-8820 Wädenswil, SWITZERLAND
ANALYSIS OF THE BACTERIUM ISOLATED FROM THE RHIZOSPHERE AND CAPABLE OF DEGRADING AHLs
J. Przysowa, A. Michta, R.Czajkowski, S. Jafra, E. Lojkowska
Intercollegiate Faculty of Biotechnology, University of Gdansk & Medical University of Gdansk, Gdansk, POLAND

 

OLIGONUCLEOTIDE ARRAY TECHNOLOGY FOR DIFFERENTIATION OF FUSARIUM SPP BELONGING TO THE LISEOLA SECTION
Angela Quarta, Giovanni Mita, Palmiro Poltronieri, Antonio Logrieco, Angelo Visconti
Institute of Sciences of Food Production - CNR, Via Monteroni, Lecce, Italy

PHYLOGENY OF THE FORMER ERWINIA GENUS
M. Waleron, K. Waleron, E. Lojkowska
Department of Biotechnology, Faculty of Biotechnology University of Gdansk and Medical University of Gdansk. Kladki 24, 80-822 Gdansk, Poland.

 
DNA MICROARRAYS IN STUDIES OF PLANT RESPONSES TO ABIOTIC STRESSES
A. Ludwikow1, J. Sadowski 1,2
1Department of Biotechnology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Miedzychodzka 5, 60-371 Poznan, Poland
2Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, 61-479 Poznan, Poland